matlab package suite2p Search Results


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Suite2p, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc oasis deconvolution algorithm
Oasis Deconvolution Algorithm, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Jackson Laboratory mouse: b6.cg-gt(rosa)26sor tm14(cag-tdtomato)hze /j
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Mouse: B6.Cg Gt(Rosa)26sor Tm14(Cag Tdtomato)Hze /J, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Addgene inc aav1.syn.gcamp6f.wpre.sv40
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Aav1.Syn.Gcamp6f.Wpre.Sv40, supplied by Addgene inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Jackson Laboratory camkiia-tta: b6; cba-tg(camk2a-tta)1mmay/j
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Camkiia Tta: B6; Cba Tg(Camk2a Tta)1mmay/J, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Key resources table

Journal: Cell reports

Article Title: The spatial scale of somatostatin subnetworks increases from sensory to association cortex

doi: 10.1016/j.celrep.2022.111319

Figure Lengend Snippet: Key resources table

Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Bacterial and virus strains AAV1.Syn.GCaMP6f.WPRE.SV40 Chen et al., 2013 Addgene Cat#: 100837-AAV1 Deposited data DF/F, deconvolved, and behavioral data This study DOI: 10.17632/yhr8vhk6yv.1 Experimental models: Organisms/strains Mouse: Sst tm2.1(cre)Zjh /J Jackson Laboratories RRID: IMSR_JAX: 013044 Mouse: B6.Cg-Gt(ROSA)26Sor tm14(CAG-tdTomato)Hze /J Jackson Laboratories RRID: IMSR_JAX: 007914 Software and algorithms Matlab Mathworks RRID: SCR_001622 R Glmnet package Friedman et al., 2010 https://cran.r-project.org/web/packages/glmnet/index.html OASIS Friedrich et al., 2017 https://github.com/j-friedrich/OASIS Suite2p Pachitariu et al., 2017 https://github.com/cortex-lab/Suite2P Wavesurfer Janelia Research Campus https://www.janelia.org/open-science/wavesurfer Original Code This study DOI: 10.5281/zenodo.6964753 Open in a separate window Key resources table All original code has been deposited at Zenodo and is publicly available as of the date of publication.

Techniques: Software

Key resources table

Journal: Cell reports

Article Title: The spatial scale of somatostatin subnetworks increases from sensory to association cortex

doi: 10.1016/j.celrep.2022.111319

Figure Lengend Snippet: Key resources table

Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Bacterial and virus strains AAV1.Syn.GCaMP6f.WPRE.SV40 Chen et al., 2013 Addgene Cat#: 100837-AAV1 Deposited data DF/F, deconvolved, and behavioral data This study DOI: 10.17632/yhr8vhk6yv.1 Experimental models: Organisms/strains Mouse: Sst tm2.1(cre)Zjh /J Jackson Laboratories RRID: IMSR_JAX: 013044 Mouse: B6.Cg-Gt(ROSA)26Sor tm14(CAG-tdTomato)Hze /J Jackson Laboratories RRID: IMSR_JAX: 007914 Software and algorithms Matlab Mathworks RRID: SCR_001622 R Glmnet package Friedman et al., 2010 https://cran.r-project.org/web/packages/glmnet/index.html OASIS Friedrich et al., 2017 https://github.com/j-friedrich/OASIS Suite2p Pachitariu et al., 2017 https://github.com/cortex-lab/Suite2P Wavesurfer Janelia Research Campus https://www.janelia.org/open-science/wavesurfer Original Code This study DOI: 10.5281/zenodo.6964753 Open in a separate window Key resources table All original code has been deposited at Zenodo and is publicly available as of the date of publication.

Techniques: Software